From 1c4e4ebb524455c06abb36cc455a6d85d0031b9c Mon Sep 17 00:00:00 2001
From: "Doorn, Nina (UT-TNW)" <n.doorn-1@utwente.nl>
Date: Wed, 15 Jan 2025 11:32:38 +0100
Subject: [PATCH] corrected saving location error
---
MakeFigures.py | 14 ++++++++------
1 file changed, 8 insertions(+), 6 deletions(-)
diff --git a/MakeFigures.py b/MakeFigures.py
index f8d97a2..3d21824 100644
--- a/MakeFigures.py
+++ b/MakeFigures.py
@@ -2,21 +2,23 @@ import pickle
import scipy.io as sio
from brian2 import *
-#specify where the images must be saved
-outputdir = '/home/yourdir'
+# specify where the images must be saved
+outputdir = '../Figures/'
+
def rasterplot(APs, savetitle, dt, start, stop, color):
figure(figsize=(8.5, 2.2), dpi=300)
plt.plot(APs[:, 1] * dt, APs[:, 0], '|', markeredgecolor=color, ms=9, alpha=.3)
- plt.hlines([-0.3, 0.7, 1.7, 2.7, 3.7, 4.7, 5.7, 6.7, 7.7, 8.7, 9.7, 10.7], -3, stop / second + 1300, colors='black',
- linewidths=0.7)
+ plt.hlines([-0.3, 0.7, 1.7, 2.7, 3.7, 4.7, 5.7, 6.7, 7.7, 8.7, 9.7, 10.7], -3, stop / second + 1300,
+ colors='black', linewidths=0.7)
xlim([start/second, stop/second])
axis("off")
tight_layout()
savefig(outputdir + savetitle + '.png', dpi=300, bbox_inches='tight')
show()
-def Marginaldiffplot(samples1, samples2, numparams, priorlimits, parlabels, savetitle):
+
+def marginaldiffplot(samples1, samples2, numparams, priorlimits, parlabels, savetitle):
for ind in range(numparams):
fig, ax = plt.subplots(1, 1, figsize=(1.7, 1.7), dpi=300)
vals, xvals = np.histogram(samples1[:, ind], bins=30)
@@ -28,6 +30,6 @@ def Marginaldiffplot(samples1, samples2, numparams, priorlimits, parlabels, save
ax.set_xlabel(parlabels[ind])
ax.spines[['right', 'top']].set_visible(False)
tight_layout()
- plt.savefig(savetitle + parlabels[ind] + '.png', dpi=400, format='png',
+ plt.savefig(outputdir + savetitle + parlabels[ind] + '.png', dpi=400, format='png',
bbox_inches="tight", transparent=True)
plt.show()
--
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